PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086744.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 198aa    MW: 22942.8 Da    PI: 9.2037
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding64.61.9e-201562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd++l+++++ +G ++WktIa + g++R++k+c++rw +yl
   XP_028086744.1 15 RGAWTAEEDQKLAEVIESHGAKRWKTIAIKAGLNRCGKSCRLRWMNYL 62
                     89********************************************97 PP
2Myb_DNA-binding50.83.8e-1668113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T +E++l+ +++k+lG++ W++Ia +++ gRt++++k++w+++l
   XP_028086744.1  68 RGNITDQEEDLIFRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MASKRTESMK KEINRGAWTA EEDQKLAEVI ESHGAKRWKT IAIKAGLNRC GKSCRLRWMN  60
YLRPNIKRGN ITDQEEDLIF RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKINQM  120
EKQNEGSRGE LGSKTKRRRV VEKANEDMKG EETSNGGEDS KINFDHDDFF DFSNESPFTL  180
GWVSQFLDLD NNLCEFSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136140KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-55MYB family protein