PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086748.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 194aa    MW: 21903 Da    PI: 7.1843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.63e-1067115255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+ + + +r RR ri ++++ L+ellP++     k   Ka+ L   +++Ik+Lq
  XP_028086748.1  67 RQRATATDRTRRMRIAERLDALKELLPQP-----KEGGKASLLDDIIDHIKYLQ 115
                     788899**********************9.....5588999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MFGRLKDNAV YQGVKYTRPH NEGGLMNNFT SAEYQIHVQK QESNEPHPGV AVEAQGFSSK  60
LRNRISRQRA TATDRTRRMR IAERLDALKE LLPQPKEGGK ASLLDDIIDH IKYLQLQIKD  120
LSRSRLGGES TSDSFIFLEG YGHYLLQELM LNEPLEEMIG KLLQVNPLAA TELLESRGLV  180
IMPTAFAEGL HQSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.12e-17bHLH family protein