PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086767.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARF
Protein Properties Length: 715aa    MW: 78395 Da    PI: 7.2972
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.99.7e-24141242199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ F + ++L +gD v+F +    +
  XP_028086767.1 141 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFINKKKLVSGDAVLFLR--GGD 232
                     99****************************963.3445679************************************************3..378 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_028086767.1 233 GELRLGIRRA 242
                     999***9986 PP
2Auxin_resp118.45.8e-39267348182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a+s+++vF+v YnPras seF+++++k++k+l+++ svGmRfkm+feted+ err++G+v+gv+d+dpvrWp+SkWr+L
  XP_028086767.1 267 VVNAISMRNVFNVRYNPRASLSEFIIPFRKFSKSLSHSSSVGMRFKMRFETEDATERRYTGLVTGVNDVDPVRWPGSKWRCL 348
                     6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MCSLIDLNTV DDDDDDSPPP PPPFDSPSSS PAVCLELWHA CAGPLVSLPK KGTVVVYFPQ  60
GHLEHASDFP ATIYHLPPHV FCRVLHVNLH AEAATDEVYA QVSLIPDAQQ IEQKWRQGKI  120
EAASEEEDIE GAVKSITPHM FCKTLTASDT STHGGFSVPR RAAEDCFPPL DYKQQRPSQE  180
LVAKDLHGIE WKFRHIYRGQ PRRHLLTTGW SAFINKKKLV SGDAVLFLRG GDGELRLGIR  240
RAAQVKTDST FPALSSQKLN VGTISAVVNA ISMRNVFNVR YNPRASLSEF IIPFRKFSKS  300
LSHSSSVGMR FKMRFETEDA TERRYTGLVT GVNDVDPVRW PGSKWRCLLV RWDDLESPRH  360
NRVSPWEIEP TGSVSASSSL VAPGMKRNRV GLSSTKPDFP VPRDGTGMSD FGESFRFQKV  420
LQGQEILGFN SPCDVHNYCS SEMRRCNPGS VCSTISAIGN GVRNPFGDSS VSYDNIGFGE  480
SFQFDKVLQG QETYLNSGYR RGPAANKVQE NQDQGITDGV PSSSSGSGWS VLMQGHNACL  540
RSSTPSLQSS SPSSVLMFQQ TCTPALNFHS TCRVNQEHEI NNQKAFDISD TYCGKEVIQG  600
VSSFAISKGQ NQPGISHSTL ATHSSNGGSQ DLGTMCKSSC RLFGFPLTEG RNTTNKDCNP  660
AQVSSAYNPD TSFLPHGDQH LHPKPPLVTK LIGSSCTKGS DLYAVRDMLL DVALL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.10.0ARF family protein