PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086807.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 400aa MW: 45443.9 Da PI: 7.8432

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.3	1.3e-48	19	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptd+el+++yLkkk+++ + + evi+ev+i+k+ePwdLp k+v ++++ew+fFs+r +ky++g +++rat+ gyWkatgk+++v+s XP_028086807.1 19 MFPGFRFSPTDQELISYYLKKKLRDFDKCA-EVISEVEICKHEPWDLPaKSVIQSDNEWFFFSPRGRKYPNGLQSKRATELGYWKATGKERNVKS 112 579********************99666.99***********667777899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++g+k+tLvf++grapkge+t+W+mhey + XP_028086807.1 113 -GPNVIGTKRTLVFHTGRAPKGERTEWIMHEYCM 145 .999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MMMGEASREA QISIAASSMF PGFRFSPTDQ ELISYYLKKK LRDFDKCAEV ISEVEICKHE 60 PWDLPAKSVI QSDNEWFFFS PRGRKYPNGL QSKRATELGY WKATGKERNV KSGPNVIGTK 120 RTLVFHTGRA PKGERTEWIM HEYCMSGMSQ DSLVVCRLRK SSEFRLSDSP KQGSLSRRHL 180 PTENNSNFSL SEAGVEQLGI LEAAKPVKCS SKECSNPGSC HSAEQQIDYG SESDKTLKCQ 240 FSQPGHQGCD EEDYYADILK DDIVDLENIF PRISDPMTMV ADKLEDETRS QQLVQTIPFC 300 VIPFQGTANR RIRMRWSEKQ KICHAAEVEA NSKNYSIEGS KHLNLEQKPK CLMGILSDQR 360 LNRHSISVVI VLIILTLLFL FVSLLGVPWQ VQKFTNAFFL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MMMGEASREA QISIAASSMF PGFRFSPTDQ ELISYYLKKK LRDFDKCAEV ISEVEICKHE  60
PWDLPAKSVI QSDNEWFFFS PRGRKYPNGL QSKRATELGY WKATGKERNV KSGPNVIGTK  120
RTLVFHTGRA PKGERTEWIM HEYCMSGMSQ DSLVVCRLRK SSEFRLSDSP KQGSLSRRHL  180
PTENNSNFSL SEAGVEQLGI LEAAKPVKCS SKECSNPGSC HSAEQQIDYG SESDKTLKCQ  240
FSQPGHQGCD EEDYYADILK DDIVDLENIF PRISDPMTMV ADKLEDETRS QQLVQTIPFC  300
VIPFQGTANR RIRMRWSEKQ KICHAAEVEA NSKNYSIEGS KHLNLEQKPK CLMGILSDQR  360
LNRHSISVVI VLIILTLLFL FVSLLGVPWQ VQKFTNAFFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44290.1	1e-84	NAC family protein