PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086893.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 462aa MW: 54343.4 Da PI: 9.3674

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34.7	5.8e-11	65	135	1	72
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 +fYn+YAk +GFs+r+s+++ +n+ + +r++vCs+eg re++ + + er +++++ + ka+ +v +++ XP_028086893.1 65 SFYNAYAKVIGFSIRRSRKQICGDNKFVESRKWVCSREGVREKKYLQ-RVERFVTSVDQAQAKAMRNVGMRT 135 5******************************************9988.777777788888888887776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MDEPESSRQK EVNSKIDNQV APDGKDDVVD GKEERLASQT YDSLRMLTKV DVLQMKFNSE 60 EDAYSFYNAY AKVIGFSIRR SRKQICGDNK FVESRKWVCS REGVREKKYL QRVERFVTSV 120 DQAQAKAMRN VGMRTSQIMD FMVYQSEGYE EVGFIHRDLH NQFQAERKYN VDKDNRLDKI 180 FWADGRSRMD YAVFGDVLVF DTTYRTNQHK KPFVILASVS NHFMTITFGC ALLPDKIMDT 240 YTWVLETLIE AMDGQRPIFV VTDGDRVMRQ AIEIVIPHCR HRLCSWHLEK NASTNVHTPE 300 FTNDFALLML KKCKIVEFDN VWARMVKQYK LENNNRVLEI HRKRNKWAEV YFRGHMFAGM 360 RSTQRVEGMN AYFNMFLEQK VRLYEFVAQY DRALARMRVN EAKTESKTEN SFPILITPLR 420 SLEKHAVEHF TTYHEPSILK CENKGLQVIK IGKLILKIPK FP

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MDEPESSRQK EVNSKIDNQV APDGKDDVVD GKEERLASQT YDSLRMLTKV DVLQMKFNSE  60
EDAYSFYNAY AKVIGFSIRR SRKQICGDNK FVESRKWVCS REGVREKKYL QRVERFVTSV  120
DQAQAKAMRN VGMRTSQIMD FMVYQSEGYE EVGFIHRDLH NQFQAERKYN VDKDNRLDKI  180
FWADGRSRMD YAVFGDVLVF DTTYRTNQHK KPFVILASVS NHFMTITFGC ALLPDKIMDT  240
YTWVLETLIE AMDGQRPIFV VTDGDRVMRQ AIEIVIPHCR HRLCSWHLEK NASTNVHTPE  300
FTNDFALLML KKCKIVEFDN VWARMVKQYK LENNNRVLEI HRKRNKWAEV YFRGHMFAGM  360
RSTQRVEGMN AYFNMFLEQK VRLYEFVAQY DRALARMRVN EAKTESKTEN SFPILITPLR  420
SLEKHAVEHF TTYHEPSILK CENKGLQVIK IGKLILKIPK FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-58	FAR1 family protein