PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086934.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 757aa MW: 87360.3 Da PI: 6.8959

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.8	4.4e-24	134	225	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+++++++ HnHel XP_028086934.1 134 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgVTQWYISQFSNVHNHELL 225 69******************8888.**************************************998766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MDIQFLCSKW QTPKREEHER SERGSLRVYR IISTRFQLSL PGFSSKIATR ASKPVYCVDL 60 SCKMATKSLN NIWIRRQQCP CGDWKCYIKC EGDDQTTLGS QLVKSETASS SSSSSDVFTP 120 YVGQIFKTDD EAFEYYSNFA RKNGFSIRKA RSTESQNLGV YRRDFVCYRS GFNQPRKKAN 180 VEHPRDRKSV RCGCDAKLYL TKEIVDGVTQ WYISQFSNVH NHELLEDDQV RLLPAYRKIQ 240 EDDQERILLL SKAGFPVNRI VKVLEIEKGV QPGQLPFIEK DVRNFIRTCK KTVQENDALL 300 TEKRENDMLE LLDACNAMAG KDEGFVYNFT KDENGKIENI AWSYGDAVRA FAVFGDVLTF 360 DTTYRSITYN MLLGVWFGID NHGKAIFLGC VLIQDENSQS FSWALQQTFI RFMRGRRPET 420 IVTDIDAGLR DAMATELPNT KHVICLWQIL SKVSSWFSLA LGSQFEEFKS EFDILCHLEN 480 AEDFEHQWNN LVARFGLGSD KHIALLFSFR ASWPFSYIRG YFLARTRTPE YSKSVDTFLR 540 SILSAQTCLQ VLFEQVHTAA NFQYQTRGEP QYMPIKTCLP VEEHARSMLT PFAFNALQHE 600 IVLSMQYAAT EMANGSFLLR HYKKMEGESL VFWIPEEEQV HCSCKEFEHS GILCRHSIRV 660 FVLKNHFQIP VKYFPLRWRL ESSLVPVDDP IIQCNNDECS QAFHSLTATL FSESLISKER 720 FNYVHNELTQ LLENVQQMPA NNNEITLNLA PNNVSES

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MDIQFLCSKW QTPKREEHER SERGSLRVYR IISTRFQLSL PGFSSKIATR ASKPVYCVDL  60
SCKMATKSLN NIWIRRQQCP CGDWKCYIKC EGDDQTTLGS QLVKSETASS SSSSSDVFTP  120
YVGQIFKTDD EAFEYYSNFA RKNGFSIRKA RSTESQNLGV YRRDFVCYRS GFNQPRKKAN  180
VEHPRDRKSV RCGCDAKLYL TKEIVDGVTQ WYISQFSNVH NHELLEDDQV RLLPAYRKIQ  240
EDDQERILLL SKAGFPVNRI VKVLEIEKGV QPGQLPFIEK DVRNFIRTCK KTVQENDALL  300
TEKRENDMLE LLDACNAMAG KDEGFVYNFT KDENGKIENI AWSYGDAVRA FAVFGDVLTF  360
DTTYRSITYN MLLGVWFGID NHGKAIFLGC VLIQDENSQS FSWALQQTFI RFMRGRRPET  420
IVTDIDAGLR DAMATELPNT KHVICLWQIL SKVSSWFSLA LGSQFEEFKS EFDILCHLEN  480
AEDFEHQWNN LVARFGLGSD KHIALLFSFR ASWPFSYIRG YFLARTRTPE YSKSVDTFLR  540
SILSAQTCLQ VLFEQVHTAA NFQYQTRGEP QYMPIKTCLP VEEHARSMLT PFAFNALQHE  600
IVLSMQYAAT EMANGSFLLR HYKKMEGESL VFWIPEEEQV HCSCKEFEHS GILCRHSIRV  660
FVLKNHFQIP VKYFPLRWRL ESSLVPVDDP IIQCNNDECS QAFHSLTATL FSESLISKER  720
FNYVHNELTQ LLENVQQMPA NNNEITLNLA PNNVSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein