PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086935.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 756aa MW: 87232.1 Da PI: 6.8959

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.8	4.4e-24	134	225	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+++++++ HnHel XP_028086935.1 134 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgVTQWYISQFSNVHNHELL 225 69******************8888.**************************************998766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MDIQFLCSKW QTPKREEHER SERGSLRVYR IISTRFQLSL PGFSSKIATR ASKPVYCVDL 60 SCKMATKSLN NIWIRRQQCP CGDWKCYIKC EGDDQTTLGS QLVKSETASS SSSSSDVFTP 120 YVGQIFKTDD EAFEYYSNFA RKNGFSIRKA RSTESQNLGV YRRDFVCYRS GFNQPRKKAN 180 VEHPRDRKSV RCGCDAKLYL TKEIVDGVTQ WYISQFSNVH NHELLEDDQV RLLPAYRKIQ 240 EDDQERILLL SKAGFPVNRI VKVLEIEKGV QPGQLPFIEK DVRNFIRTCK KTVQENDALL 300 TEKRENDMLE LLDACNAMAG KDEGFVYNFT KDENGKIENI AWSYGDAVRA FAVFGDVLTF 360 DTTYRSITYN MLLGVWFGID NHGKAIFLGC VLIQDENSQS FSWALQTFIR FMRGRRPETI 420 VTDIDAGLRD AMATELPNTK HVICLWQILS KVSSWFSLAL GSQFEEFKSE FDILCHLENA 480 EDFEHQWNNL VARFGLGSDK HIALLFSFRA SWPFSYIRGY FLARTRTPEY SKSVDTFLRS 540 ILSAQTCLQV LFEQVHTAAN FQYQTRGEPQ YMPIKTCLPV EEHARSMLTP FAFNALQHEI 600 VLSMQYAATE MANGSFLLRH YKKMEGESLV FWIPEEEQVH CSCKEFEHSG ILCRHSIRVF 660 VLKNHFQIPV KYFPLRWRLE SSLVPVDDPI IQCNNDECSQ AFHSLTATLF SESLISKERF 720 NYVHNELTQL LENVQQMPAN NNEITLNLAP NNVSES

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MDIQFLCSKW QTPKREEHER SERGSLRVYR IISTRFQLSL PGFSSKIATR ASKPVYCVDL  60
SCKMATKSLN NIWIRRQQCP CGDWKCYIKC EGDDQTTLGS QLVKSETASS SSSSSDVFTP  120
YVGQIFKTDD EAFEYYSNFA RKNGFSIRKA RSTESQNLGV YRRDFVCYRS GFNQPRKKAN  180
VEHPRDRKSV RCGCDAKLYL TKEIVDGVTQ WYISQFSNVH NHELLEDDQV RLLPAYRKIQ  240
EDDQERILLL SKAGFPVNRI VKVLEIEKGV QPGQLPFIEK DVRNFIRTCK KTVQENDALL  300
TEKRENDMLE LLDACNAMAG KDEGFVYNFT KDENGKIENI AWSYGDAVRA FAVFGDVLTF  360
DTTYRSITYN MLLGVWFGID NHGKAIFLGC VLIQDENSQS FSWALQTFIR FMRGRRPETI  420
VTDIDAGLRD AMATELPNTK HVICLWQILS KVSSWFSLAL GSQFEEFKSE FDILCHLENA  480
EDFEHQWNNL VARFGLGSDK HIALLFSFRA SWPFSYIRGY FLARTRTPEY SKSVDTFLRS  540
ILSAQTCLQV LFEQVHTAAN FQYQTRGEPQ YMPIKTCLPV EEHARSMLTP FAFNALQHEI  600
VLSMQYAATE MANGSFLLRH YKKMEGESLV FWIPEEEQVH CSCKEFEHSG ILCRHSIRVF  660
VLKNHFQIPV KYFPLRWRLE SSLVPVDDPI IQCNNDECSQ AFHSLTATLF SESLISKERF  720
NYVHNELTQL LENVQQMPAN NNEITLNLAP NNVSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein