PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087048.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 177aa    MW: 20578.7 Da    PI: 6.5947
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.61.8e-171385174
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74
                    +fYn+Y+ ++GFs+r+++s+k+k +++ + r +vC+keg+ + +k++   +++ rae+ tgC+a+l vk++k+ 
  XP_028087048.1 13 DFYNAYGGRMGFSIRRDYSRKNKFTDQLIARLLVCNKEGFWKVDKRD-PLTKNLRAESMTGCEAQLYVKLDKER 85
                    6******************************************9999.99999****************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MTVFFDSEQG AYDFYNAYGG RMGFSIRRDY SRKNKFTDQL IARLLVCNKE GFWKVDKRDP  60
LTKNLRAESM TGCEAQLYVK LDKERVLNEK QYKKLEVGYA LCQRLPKVKA AIIMLIQMGN  120
VYTKKIFEEF QIEYFRSIES DIETIKSSEA CTIYTVVDIV GETCKESEDG EGWLFGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.28e-14FAR1 family protein