PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087117.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 146aa    MW: 16361.6 Da    PI: 7.0415
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.3e-113576955
                    HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     r RR+ri ++f +L+ l+P  a      K++ +++Le+A++Y+k Lq
  XP_028087117.1 35 ARERRHRISDKFKTLQNLVPGgA------KMDTVSMLEEAIHYVKFLQ 76
                    699*****************966......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MDCFSYFVGQ PNNKEKKKKS RKVVKLSTDP QSVAARERRH RISDKFKTLQ NLVPGGAKMD  60
TVSMLEEAIH YVKFLQTQIW LHQTMIDFMD DHDHDTSVLI PPNSGGVDQW SLCLPENLVG  120
SGEVVAPPDS CFQGGETKGF GGTMNY