PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087208.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 209aa MW: 23973 Da PI: 6.7815

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.1e-18	11	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll ++v +G+g+Wk I+ + g++R++k+c++rw++yl XP_028087208.1 11 KGCWTEEEDRLLRKYVDTFGKGSWKHIPTKSGLNRCRKSCRLRWLNYL 58 799*******************************************97 PP
2	Myb_DNA-binding	48.4	2.2e-15	64	108	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + +Ed+l+++++++lG++ W++Ia +++ gRt++++k++w++ XP_028087208.1 64 RGDFGVDEDDLIIKLHRLLGNR-WSLIAGRIP-GRTANDIKNYWNSC 108 788899**************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MSHPTTNGLR KGCWTEEEDR LLRKYVDTFG KGSWKHIPTK SGLNRCRKSC RLRWLNYLRP 60 NIKRGDFGVD EDDLIIKLHR LLGNRWSLIA GRIPGRTAND IKNYWNSCLS KKASTSDSKT 120 TSSLETQSAM NLEPLEGEFQ SSSDRKTEGE EEEDEEDTAL FWRSLLLEGV LKETRKLSVK 180 IKEKKVQDDD FFQGLGDLVQ DMEILGGSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-50	MYB family protein