PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087387.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 117aa MW: 12610.5 Da PI: 12.0282

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.6	4.6e-34	32	104	3	75
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasecea 75 +kk + +++ +kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+ +++tgt+++ as+++ XP_028087387.1 32 VKKPPAKDRPSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSLIAATGTGTTLASFSTV 104 79*************************************************************9988877622 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MSTSDGVANG VINGAIIEQQ RLQPPGNGAL SVKKPPAKDR PSKVDGRGRR IRMPIICAAR 60 VFQLTRELGH KSDGQTIEWL LRQAEPSLIA ATGTGTTLAS FSTVSVSVRN SSFLRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-44	TCP family protein