PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087401.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 171aa    MW: 19929.5 Da    PI: 8.3466
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR166.19.3e-211198190
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    ++YneYA++ GF +r++++++++ +++ ++r fvCs+e +re ++ +  +++  +  tr+gC+ ++  k e ++ +e+ +l  eHnH+l 
  XP_028087401.1 11 NMYNEYAYHKGFCIRRDEKTYKRGTTQLIRRSFVCSREEFREFSDLS-PEKKYDKLDTRCGCQTQVIFKVE-NSIYEIRRLIIEHNHPLI 98
                    58*****************************************9999.88899999*************99.****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MIANSEDEAY NMYNEYAYHK GFCIRRDEKT YKRGTTQLIR RSFVCSREEF REFSDLSPEK  60
KYDKLDTRCG CQTQVIFKVE NSIYEIRRLI IEHNHPLIES SQRHSIRSAC KIHDTSKGVI  120
KSMVDAGIWV SKTYGYLLNE AGGYQSIGFT KRDCPNYIQV EQSKRIEAGD G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-21FAR1 family protein