PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087409.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 163aa    MW: 18898.2 Da    PI: 7.0304
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1781.8e-2431119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fY++Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +k++   +++ r+e rtgC+a+l++k ++  +k+ v++++++HnH ++
  XP_028087409.1  31 DFYDTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNLRQEVRTGCQARLVIKWDRnMQKFFVSDFVEQHNHIFV 119
                     6********************9.6666****************9999.999999***************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MEPNNHENDG GECDWKPRVR MAFDTEQEAY DFYDTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NLRQEVRTGC QARLVIKWDR NMQKFFVSDF VEQHNHIFVP  120
TECTHMLPSQ RKIFASQATE IDLAEKSGIH LNAAFELMGN EAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-22FAR1 family protein