PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087410.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 168aa    MW: 19116.1 Da    PI: 5.6257
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.71.5e-2129117190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ +v Fs+r+++ +ks ++g it+  f Cskeg+r+ +k++   +++ raetrt+C   +++k+++  gk++vt++++ Hn +l+
  XP_028087410.1  29 DFYNSYGGRVVFSIRREYAHKS-KTGDITSTAFACSKEGHRKVDKRD-YVAKNARAETRTSCGSPMNIKLNRkIGKYNVTNFVEMHNYHLV 117
                     6********************9.6677*****************999.9999******************9989*************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MADAQCGKDD TQFGPILGME FDYEQFAYDF YNSYGGRVVF SIRREYAHKS KTGDITSTAF  60
ACSKEGHRKV DKRDYVAKNA RAETRTSCGS PMNIKLNRKI GKYNVTNFVE MHNYHLVASQ  120
VEEGHKQFLV FMAASEAEGQ TDSPKRSVEN ITDDESSESD HEEREDIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147DSPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.29e-17FAR1 family protein