PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087474.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 399aa MW: 44802.6 Da PI: 7.4381

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	4.1e-53	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+kv++++l++ e+ik++diyk++PwdLpk+++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_028087474.1 14 MLPGFRFHPTDEELVGFYLKRKVQQRPLSI-EIIKQLDIYKFDPWDLPKMATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579*************************.89***********9888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg ktdW+mhe+rl XP_028087474.1 108 eGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 141 56677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDERGETDKM DEIMLPGFRF HPTDEELVGF YLKRKVQQRP LSIEIIKQLD IYKFDPWDLP 60 KMATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGS KCIGLKKSLV 120 FYKGRAAKGI KTDWMMHEFR LPSSLTVSDS ISSPHKRFLD KNIPPNESWA ICRIFKKTIS 180 TAQRGISQSW VSPILPETTT SEILSQGPHS TQFTSENMSL TPNKSSSAFQ FSSNNDLQQS 240 CITASFPPLY VPSYYKPINH MATKPLSLGD LPTAYPFSSL VNLPGPSKCT VDEPSMFLNM 300 SSTTMFGDFG KASESTEFSG LQEQCNGFSI ALPQEVQGSG SHGEEINLMR DPNGAHFDEQ 360 WGTMRSVGIP FSLPSNLVWD SSPCPSEMST SFSTNKCYS

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDERGETDKM DEIMLPGFRF HPTDEELVGF YLKRKVQQRP LSIEIIKQLD IYKFDPWDLP  60
KMATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGS KCIGLKKSLV  120
FYKGRAAKGI KTDWMMHEFR LPSSLTVSDS ISSPHKRFLD KNIPPNESWA ICRIFKKTIS  180
TAQRGISQSW VSPILPETTT SEILSQGPHS TQFTSENMSL TPNKSSSAFQ FSSNNDLQQS  240
CITASFPPLY VPSYYKPINH MATKPLSLGD LPTAYPFSSL VNLPGPSKCT VDEPSMFLNM  300
SSTTMFGDFG KASESTEFSG LQEQCNGFSI ALPQEVQGSG SHGEEINLMR DPNGAHFDEQ  360
WGTMRSVGIP FSLPSNLVWD SSPCPSEMST SFSTNKCYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-116	NAC family protein