PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087490.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 316aa    MW: 36715.7 Da    PI: 7.4977
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.71.6e-0748110166
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkakl 66 
                     +fY +YAk++GF v+ ++++   ++ge++     C++  kr+++++   +  +++ ++ ++Ckak 
  XP_028087490.1  48 SFYAKYAKHLGFAVSYRTQNIG-QDGEVKYFGVECTRARKRTKRSEV--QPLEPSLSSFIECKAKR 110
                     5*************99988876.8999***************99876..99999999******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDIDSTNLSL NGSEEVEETE NNPSLNEIGD VEEPKKGMCF SSKQEVYSFY AKYAKHLGFA  60
VSYRTQNIGQ DGEVKYFGVE CTRARKRTKR SEVQPLEPSL SSFIECKAKR ILSPVKRRLE  120
INDEARIGAA RNFHSIVVEA WGYEALTFDE QDARNHIQSM RRMRLGVGDT KSVALYFHRM  180
QQQNSNFYYA IDLDEDGRMR NLFWADARRV NHHGQSILLG CGLLSNENTK TFLWLFREWL  240
SCMSDVPPKA IITDQCRAMQ NAIEVVFPEA RHRWCLWHIM KKIPEKLRGY AQYESIKLAL  300
PNAVYDCFTK HKFDEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.13e-41FAR1 family protein