PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087491.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 249aa    MW: 27790.4 Da    PI: 5.5111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-19129178255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrd +     r +r++lg+f ta+eAa+a+++a+ +++g
  XP_028087491.1 129 LYRGVRQRP-WGKWAAEIRDpW-----RaARVWLGTFHTAKEAARAYDKAAVEFRG 178
                     59*******.**********88.....77***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDPDQIQKLF QDLQTEEIQA DNPFPPLYLT QDQEFFIMVS AIKHVISGAN LEPIRPSTSS  60
SLASSSGTKA EQTVISLPEA DTCPVCKING CLGCEFFTLT TSTSGTTDTT DVVAGAEGEK  120
KKKRREKKLY RGVRQRPWGK WAAEIRDPWR AARVWLGTFH TAKEAARAYD KAAVEFRGAK  180
AKTNFALSDY QYELDRALER SNARDKAKMK SKVEGTCGET VAASNEANEF WAGIMEDSEL  240
RDLLMMEFP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119129EKKKKRREKKL
2120125KKKKRR
3120128KKKKRREKK
4121126KKKKRR
5121128KKKRREKK
6122127KKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-30ERF family protein