PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087657.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 358aa MW: 39553.5 Da PI: 8.3383

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.2	2.7e-56	14	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv + +++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_028087657.1 14 LPPGFRFHPTDEELITYYLLKKVLDCNFTG-RAITEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 107 79***********************999.88***********99999************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 k lvg+kktLvfy+grapkgek++Wvmheyrle XP_028087657.1 108 KAVLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 141 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
METYHHFDNS DSNLPPGFRF HPTDEELITY YLLKKVLDCN FTGRAITEVD LNKCEPWELP 60 EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKAV LVGMKKTLVF 120 YRGRAPKGEK SNWVMHEYRL EGKFAYHYLS RSSKDEWVIS RVFQKSASGG GSAVAGSGGK 180 KSRLNTGINL YPEVSSPTSS SSLPPLLDSS SSPYAPVTDR QSCSYDSNAA AKEHVPCFST 240 AIAATNFNPH AATNFTPHVP FDLPPPPPLN TVVDPSAARF TRNIGGLQGF PNLRSLQENL 300 QLPFFFSPVV PPTMHNGSDM GGCSSVGSWP PPENPKVEGG GGGRVVLGAT ELDCMWSY

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

METYHHFDNS DSNLPPGFRF HPTDEELITY YLLKKVLDCN FTGRAITEVD LNKCEPWELP  60
EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKAV LVGMKKTLVF  120
YRGRAPKGEK SNWVMHEYRL EGKFAYHYLS RSSKDEWVIS RVFQKSASGG GSAVAGSGGK  180
KSRLNTGINL YPEVSSPTSS SSLPPLLDSS SSPYAPVTDR QSCSYDSNAA AKEHVPCFST  240
AIAATNFNPH AATNFTPHVP FDLPPPPPLN TVVDPSAARF TRNIGGLQGF PNLRSLQENL  300
QLPFFFSPVV PPTMHNGSDM GGCSSVGSWP PPENPKVEGG GGGRVVLGAT ELDCMWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-100	NAC family protein