PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087661.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 167aa    MW: 19108.1 Da    PI: 7.7132
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.54.1e-07130149525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                      Cr+f + G C++GdrC++ H
  XP_028087661.1 130 TCRDFVA-GRCRRGDRCPYLH 149
                     7******.************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSRSGRTCVS KWDQPRLFPG DTEYGIWLQN VGESVHNKES QSGRDCPELA GSTNPELYRV  60
ECNNEDEILE WYGEGCYMTK MSPGLDHWRQ QKYSHFPRNG RGRSDRSRSR SPPHGFKREL  120
GLDGSTAART CRDFVAGRCR RGDRCPYLHQ DHGDHEDRCP EGGLAKC