PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087689.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 304aa MW: 35204.7 Da PI: 7.5692

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.3	8.9e-17	49	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk++GF + ++++ + r+ge++ C++ +r+++++ + +++ +++++Cka+++ +++kdg++++t+++l+H+H+l XP_028087689.1 49 FYAKYAKQLGFAIAYRTQNVT-RDGEVKYFGIECTRARNRTKRSEV--NPLEPSLSSKIDCKARVRATLQKDGRYKLTTVVLKHTHDLI 134 9***********9998887.8999********99999876..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MDIDSMNNSV NVSEEVEKQD NNVEFNESGE VEEPKKGMYF ISKQEVYTFY AKYAKQLGFA 60 IAYRTQNVTR DGEVKYFGIE CTRARNRTKR SEVNPLEPSL SSKIDCKARV RATLQKDGRY 120 KLTTVVLKHT HDLIPTDSRH FPMNKRILTS VKRRLEVNDA AEIGVARNFH SIVVEAGGYE 180 ALTFDEQDAR NYIQNARRFR LGVGDAESVT FYFHKMQQQN LNFYSTIDLD EDDALPKAII 240 TDQCKAMQNA IEIVFPQARH RLCLRHIMKK IPEKLRGYSQ YESIKVALSN AVYDSFTKDE 300 FEEY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	90	RNRTKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-20	FAR1 family protein