PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087835.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 292aa MW: 33038.6 Da PI: 10.1068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll ++++++G g+W++ +++ g+ R++k+c++rw +yl XP_028087835.1 14 RGPWTAREDALLTKYIQLHGEGNWRSLPKKAGLLRCGKSCRLRWMNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++Ed+l+++ +++lG++ W++Ia +++ gRt++++k++w+++l XP_028087835.1 67 RGNISPDEDDLIIKMHALLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MGRAPCCSKV GLHRGPWTAR EDALLTKYIQ LHGEGNWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI SPDEDDLIIK MHALLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKRLLSQG 120 TDPNTHKKIS DPHLKEPKKR RSNSKKQKNK SKSNVVVIEK LKVHNPKPTR IKSLSSFSMS 180 RNGSFGWTIS GGSSSSHEGD HRGSLLVGTE VVHVPRSDFK DDADHENRVG FLVGDDHQDR 240 DLVNGSALEC HSQLLPMSDH TLQKLYEEYL QLLKAEDDVK VQLDSFAESL LI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-69	MYB family protein