PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087837.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 235aa    MW: 26593 Da    PI: 9.5772
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.89.1e-171055148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ +++Ed+l+++ +++lG++ W++Ia +++ gRt++++k++w+++l
   XP_028087837.1 10 RGNISPDEDDLIIKMHALLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 55
                     7899******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MNYLRPDIKR GNISPDEDDL IIKMHALLGN RWSLIAGRLP GRTDNEIKNY WNTHLSKRLL  60
SQGTDPNTHK KISDPHLKEP KKRRSNSKKQ KNKSKSNVVV IEKLKVHNPK PTRIKSLSSF  120
SMSRNGSFGW TISGGSSSSH EGDHRGSLLV GTEVVHVPRS DFKDDADHEN RVGFLVGDDH  180
QDRDLVNGSA LECHSQLLPM SDHTLQKLYE EYLQLLKAED DVKVQLDSFA ESLLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-37MYB family protein