PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087853.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 338aa    MW: 36834.2 Da    PI: 6.7557
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-13104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r + + Rt+ q+ s+ qky
   XP_028087853.1 104 PWTEEEHRLFLLGLQKLGKGDWRGISRNFVTSRTPTQVASHAQKY 148
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MTRRCSHCAN DGHNSRTCPS RAGVKLFGVR LTDGGSIIKK SASMGNLSAH YHSSSSAAAS  60
PNPSSPSLDP IHDPLHLPDG YLSDDPAHAT SSSNRRAQRK KGVPWTEEEH RLFLLGLQKL  120
GKGDWRGISR NFVTSRTPTQ VASHAQKYFI RHTNASRRKR RSSLFDMVPE MGIDPPTLPE  180
EQFALPPSEA VETDTSYSLL SLKLSLKPEF EPMEATSEDK FEEAEEGTMP LGENQTTVVP  240
TSSFPVYLPV PFPHWLSSTG PPEEERAVDT SNHQVIRPIP ILPKEPVNVD ELVGMSQLSL  300
GESGTGHIGS SKPLSLNLFG APSRPSAFHA STPVNESD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.12e-80MYB_related family protein