PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088056.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 152aa    MW: 17568.3 Da    PI: 8.7314
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.81.1e-1463148191
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+k +++s+v+   +l +p++f+e ++  ++ + t++l d ++  +++ k+ + k+s    l++GW+ F +a++L++gD +vF+l+++ +f+
  XP_028088056.1  63 FVKLMIRSNVTVGFLLNFPRHFCEMYM--PRYDATVVLVDgSEEGEYQAKYLFGKNS----LSAGWRFFSNAHKLNVGDALVFQLIKHCTFK 148
                     89**********************997..456678999995677*******999999....************************9977774 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MEMEKELLST AKRPKQVVCN RCGKPRRERA IVDVFNDDSE ANSCVMNRVQ EVRANLDSQF  60
PNFVKLMIRS NVTVGFLLNF PRHFCEMYMP RYDATVVLVD GSEEGEYQAK YLFGKNSLSA  120
GWRFFSNAHK LNVGDALVFQ LIKHCTFKVI YI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-30B3 family protein