PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088059.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 325aa MW: 37552.8 Da PI: 7.8307

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.2	3.6e-25	46	134	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYne+ + +GFsvr+++s++ k++++it+r+fvC keg+++e++++ k++++r+etr+gCka ++v ++k ++k+evt++ +HnH+l XP_028088059.1 46 KFYNEFERITGFSVRIEYSNTCKKTERITSRRFVCPKEGFQREDNRD-IKTKKPRQETRIGCKALMTVVLNKkSQKYEVTDFFDDHNHPL 134 6*****************************************999.99***************9999*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MCTEAFEPPW MRDLLGPNRD ANPNLNIPDY KPRRGLEFDS LDDAKKFYNE FERITGFSVR 60 IEYSNTCKKT ERITSRRFVC PKEGFQREDN RDIKTKKPRQ ETRIGCKALM TVVLNKKSQK 120 YEVTDFFDDH NHPLHIQECV HLMPSQRKIT KAQAIEADLA EASGIRLRSS FELAFRQTEG 180 RECLGFTRQD LKNYLWTKRQ RDLKFGEAGS LLAYFADKSM KDSSFHFNMQ LDVEEQITNI 240 FWADPKMIID YSVFGDFSVI FGAALLYDET VASFEWSFRS FLDSMSGKKP KTFFTDQDPA 300 MAKAISLVMP GLGESLPMVN HGKGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-50	FAR1 family protein