PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088137.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 298aa    MW: 32916.2 Da    PI: 8.2397
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088137.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-1390138355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++h  rEr RR+++++ f++L  llP++     +K +K++i+ +Av +IksLq
  XP_028088137.1  90 ETHIWRERERRKKMRNMFSNLHALLPHL----LPKADKSTIVDEAVTHIKSLQ 138
                     57999**********************5....49******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSDLGGGHQN FFWETQSWAF SNSDDLGCID EKSGGKPPSD SGSNTQTPTG KQVEEVIAVA  60
LGKKRGGVGK NGKGCGGEAN EGKGGESDHE THIWRERERR KKMRNMFSNL HALLPHLLPK  120
ADKSTIVDEA VTHIKSLQQT LQKLQRQKLE RLHGLTPMNF DGQSSIITPQ KLPMDSREAF  180
MADQVSSNNT NSNSSNALPV SLSRFPPLFQ TWTSPNVILN VCDDHAQNSV CSMKKAGLFT  240
AICYVLEKHK LDVVSARVSS DQNRTMYMIQ AHAFYLVGNI DEAIVKAMNL EMESNLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-16bHLH family protein