PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088138.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 360aa    MW: 40024.9 Da    PI: 6.951
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-111812221055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r RR+++++ f++L  llP++     +K +K++i+ +Av +IksLq
  XP_028088138.1 181 RERRKKMRNMFSKLHALLPHL----PPKADKSTIVDEAVTHIKSLQ 222
                     89******************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MESRNASFFE NTFPCRTRGE DQSSEKELED NDQDDNQVDD QGEKVDKPRR SKRARTTKSF  60
GPDFLTYMLE GESRTFHEAL VATMSDLGGG HENFFWETQS CAFSNSDGLG CIGEKSGEKP  120
PPDSRFNTQT PTGKEVEEVI AVAPGMKRGG VGNNGKGRGG EANEGKGGGE SDHEIHIWTA  180
RERRKKMRNM FSKLHALLPH LPPKADKSTI VDEAVTHIKS LQQTLQKLQR QKLERLHGLT  240
PMNFDGQSSI ITPQKLPMDL REAFMADQVS SNNTNSNSSN ALPVSLSRFP PLFQTWTSPN  300
VILNVCGDHA QNSVCSMKKA GLFTAICYLL EKHKLDVVSA HVSLDQNRTM YMIQAHVSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-29bHLH family protein