PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088160.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 257aa    MW: 29023.9 Da    PI: 4.5849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.2e-09135179655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++ r+RR++i ++ +eL +l+P       +K++ ae+ + A +YIk Lq
  XP_028088160.1 135 TIAARQRRRKITEKTQELGKLIPGG-----QKMNTAEMFQAAFKYIKFLQ 179
                     5778*******************86.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDFLGFQDSF LIPDPTTYES IILSETAYSN LFPYFSPTFD HNSSNFELFP PQELDFYPYP  60
KRQKSYEDQY YSDLIAPGLL NGFVSINPPM LPEFSPELHV PLPEFHSPLV YSCGSGVESI  120
ENVKKPNGGC LSAQTIAARQ RRRKITEKTQ ELGKLIPGGQ KMNTAEMFQA AFKYIKFLQA  180
QVGVLGMMGS IQDNEEEPVH SQELQELVAS PRIQEKLYSS EKCIVPNQLV QTLVNDSELQ  240
SNSLVLKELH QYIPISG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-31bHLH family protein