PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088194.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 432aa MW: 48711.3 Da PI: 8.1277

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.6	3.4e-09	369	424	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 + +WT+eE+e l+++v+++ + W++I + +Rt+ ++k++w++ XP_028088194.1 369 KRPWTAEEEEMLKQGVQKFSTLvnknlPWRKILEFGRhvfdGTRTPVDLKDKWRNI 424 579***************99*******998899*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MRRENGVGGR PSLSNLPPQP SPMAFSFLAE RSDSEAHPDC SHNGMWVNEV NNSDPCDIVC 60 ETSSDTSDDD RLCHDLAPKT NGNPTEKSSG LGPQGIHEQE FCLEMDWTEK EICMKCDKGG 120 EVLGCSDNCC PLAVHEECMH CSARFDSAGN FYCPYCSYKR AMLERRKARK KAMLAKKALS 180 IFLNTGMMNV DPHKQKAERV GRKEPNPSTV VRDTEYNDTR NKLELNSNEV AVKIEADHRE 240 ERFNFECTTS IVPYKGAAAS ATNERNDVVL GRCGNNARPY DGHQHKIVIG KWMRAGPIIA 300 CGHVGGACCR EEETGHQFKM VQAGKSVQVE HPRLVELNTN VVHKEQKNAA SKSRVQLMKP 360 SFPNMRRKKR PWTAEEEEML KQGVQKFSTL VNKNLPWRKI LEFGRHVFDG TRTPVDLKDK 420 WRNILVKECS TK

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MRRENGVGGR PSLSNLPPQP SPMAFSFLAE RSDSEAHPDC SHNGMWVNEV NNSDPCDIVC  60
ETSSDTSDDD RLCHDLAPKT NGNPTEKSSG LGPQGIHEQE FCLEMDWTEK EICMKCDKGG  120
EVLGCSDNCC PLAVHEECMH CSARFDSAGN FYCPYCSYKR AMLERRKARK KAMLAKKALS  180
IFLNTGMMNV DPHKQKAERV GRKEPNPSTV VRDTEYNDTR NKLELNSNEV AVKIEADHRE  240
ERFNFECTTS IVPYKGAAAS ATNERNDVVL GRCGNNARPY DGHQHKIVIG KWMRAGPIIA  300
CGHVGGACCR EEETGHQFKM VQAGKSVQVE HPRLVELNTN VVHKEQKNAA SKSRVQLMKP  360
SFPNMRRKKR PWTAEEEEML KQGVQKFSTL VNKNLPWRKI LEFGRHVFDG TRTPVDLKDK  420
WRNILVKECS TK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	7e-07	MYB_related family protein