PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088296.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 216aa MW: 24639.4 Da PI: 6.0376

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.8	7e-10	22	65	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT Ed+ + da +++ + +W++Ia ++ g+++++++ ++ XP_028088296.1 22 TWTRHEDKVFEDALVLFPEEvadRWEKIADQIP-GKSPEEVRAHY 65 7***************99*********.********9 PP
2	Myb_DNA-binding	47.8	3.2e-15	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + + +G+g+W++I+r m +Rt+ q+ s+ qk+ XP_028088296.1 122 PWTEEEHRLFLVGLQTYGKGDWRSISRNMVVTRTPTQVASHAQKF 166 8******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MFGDPNDYQW SMNCNSSAIP STWTRHEDKV FEDALVLFPE EVADRWEKIA DQIPGKSPEE 60 VRAHYEALVH DVNEIESGRV ELPSYSDESS LGWETESKAS QISFGSAAKT KHGEVERKKG 120 TPWTEEEHRL FLVGLQTYGK GDWRSISRNM VVTRTPTQVA SHAQKFFLRQ NLVKKDRKRS 180 SIHDITTAPD IHPIPLSSHF PDQGGSMGYQ NFNYPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-77	MYB family protein