PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088302.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 414aa MW: 45602.9 Da PI: 6.6276

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.6e-08	315	355	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_028088302.1 315 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 355 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MDSLGWDGTN TSSLWSHQQH EIEGSFPEDI FASISDLQKA NEPSHGNPNS DHRVTQMERH 60 SVPPLDSISV VSSSNFPQRH EAIGQFCSSS SSPSINRPYM MMNSLGTLMG DFGISTNGLQ 120 DGKARDSTTH SLESLDCLLS ATNSDTDTSV GDDHGISMIF SDCKNLWNFG SINAVSSVES 180 ASNKVLELDE TVSQARPLDT KPNTNKRSSC SYFDNLIRID SSKTEGGGFK IIQENPPKSK 240 KTRSEKCPSS SNISFQQLSS SVSSVEEPDS EAIAHMKEMF YQAAAFRPVN LGMEVAEKPK 300 RKNVRISTDP QTVAARQRRE RISERIRVLQ RLVPGGSKMD TASMLDEAAN YLKFLRSQVK 360 ALETLGHKLD LVNCPNPSPS LPLPAVPFNN NHSFPMQIHF PLQTTPNPIH HPKN

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MDSLGWDGTN TSSLWSHQQH EIEGSFPEDI FASISDLQKA NEPSHGNPNS DHRVTQMERH  60
SVPPLDSISV VSSSNFPQRH EAIGQFCSSS SSPSINRPYM MMNSLGTLMG DFGISTNGLQ  120
DGKARDSTTH SLESLDCLLS ATNSDTDTSV GDDHGISMIF SDCKNLWNFG SINAVSSVES  180
ASNKVLELDE TVSQARPLDT KPNTNKRSSC SYFDNLIRID SSKTEGGGFK IIQENPPKSK  240
KTRSEKCPSS SNISFQQLSS SVSSVEEPDS EAIAHMKEMF YQAAAFRPVN LGMEVAEKPK  300
RKNVRISTDP QTVAARQRRE RISERIRVLQ RLVPGGSKMD TASMLDEAAN YLKFLRSQVK  360
ALETLGHKLD LVNCPNPSPS LPLPAVPFNN NHSFPMQIHF PLQTTPNPIH HPKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	321	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	1e-67	bHLH family protein