PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088314.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 153aa    MW: 17755.4 Da    PI: 9.4587
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.28.9e-2561312128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     ++G++F Ptd+el+ +yL++k++g++l++e  ++e+++y+   ++L k   k+++++k +y+F++ +kk+ +gkr   ++  g+Wk   + k++ 
  XP_028088314.1   6 TVGYKFIPTDKELIFHYLREKAKGQPLPVEGLVNECNLYDD--QELSKifsKIRTKSKLYYYFTELKKKNGKGKRIDHMVGMGTWKGLDRGKPIQ 98 
                     68***************************999****99975..56653334888888888*********************************** PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++g+l+g k+++ + +  ++++e++ W m+ey+l
  XP_028088314.1  99 DNEGRLTGRKRSFDYIN--RESSEHSVWDMKEYSL 131
                     ****************4..444469********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MAAKVTVGYK FIPTDKELIF HYLREKAKGQ PLPVEGLVNE CNLYDDQELS KIFSKIRTKS  60
KLYYYFTELK KKNGKGKRID HMVGMGTWKG LDRGKPIQDN EGRLTGRKRS FDYINRESSE  120
HSVWDMKEYS LDGVSLEDDQ LIKVSSFSLV LCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.11e-16NAC family protein