PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088315.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 209aa    MW: 24402.5 Da    PI: 4.9127
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.67.4e-17693288
             NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
                    + G++F Ptd+el+ +yL++k++g++l++e  ++e+++y+   ++L k   k+++++k +y+F++ +kk+ +gkr   ++ +g+Wk   +
  XP_028088315.1  6 TIGYKFIPTDKELILHYLRAKAKGQPLPVEGLVNECNLYDD--QELLKifsKMRTKSKLYYYFTELKKKNGKGKRIDHMVGKGTWKGLDR 93
                    57***************************999*****9975..34432234888888888**************************6554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MAANITIGYK FIPTDKELIL HYLRAKAKGQ PLPVEGLVNE CNLYDDQELL KIFSKMRTKS  60
KLYYYFTELK KKNGKGKRID HMVGKGTWKG LDRVRTDEYR PVTACVTDKN YVLCVIKRKR  120
RRVEIEQQEQ PVDDSDIDHY FIEQEEPTAA VIQQELAPTD DDDHFDWDQF VWDSTLTATP  180
VIQPEKQPTT AFIQQELAEA DDNGHFDWD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117122KRKRRR
2118122RKRRR
3119123KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.14e-16NAC family protein