PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088332.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 216aa    MW: 23840.1 Da    PI: 6.4958
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26032.82e-1018675099
          DUF260 50 peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                    + ++++++++sl+yeA+ r+ +P++G+vg++ + +++ +q++++++l ++
  XP_028088332.1 18 SSNTKSAIFRSLLYEACGRIINPISGSVGLLCSNNWDRCQEAVDAVLNGS 67
                    667899************************************99988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MPSCKKYICV CVLCINNSSN TKSAIFRSLL YEACGRIINP ISGSVGLLCS NNWDRCQEAV  60
DAVLNGSPIM KLNFDDADAA AAQPIMPLKG CDIRHLTKDS DDNIRHRKTP FKRSGGRGKS  120
RFDESTTEPA RFCVAKWGGN HPEEEVNRHP SHDSSMFSVE TLEASLLVNR AVKCEPQEIE  180
VGLDLSLGFN PVFHPQVPTT VEERKLIQFF DGGGDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.15e-25LBD family protein