PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088440.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 127aa    MW: 14452.5 Da    PI: 8.498
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.51.5e-201811090
            FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                    +GFs+r++  kk+k +++ ++r +vC++eg+r+ +k++   ++++raet tgC+a+l vk+++ +g+++vt+++++HnH+l+
  XP_028088440.1  1 MGFSIRRDFCKKNKFTNQLICRLLVCNNEGFRKGDKRD-PLSQNPRAETWTGCEARLYVKLDEgTGEYVVTDFKEKHNHDLV 81
                    7**********************************999.9999*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MGFSIRRDFC KKNKFTNQLI CRLLVCNNEG FRKGDKRDPL SQNPRAETWT GCEARLYVKL  60
DEGTGEYVVT DFKEKHNHDL VSPECAHMLL SQRKISTTQA IELDLTAQSG LRLGQSFELM  120
GREAGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-14FAR1 family protein