PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088449.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 303aa    MW: 34043.3 Da    PI: 8.2276
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.71.4e-33541941128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+P+d+e++ ++L++kv +++++l+        +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + 
  XP_028088449.1  54 LPAGVKFDPSDQEIL-DHLEAKVLSDTHKLHPlidefipTLEGEnGICYTHPEKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdddggET 146
                     799***********9.99*****99995553333333222333336**********.555666777******************74445665577 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++v+  +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_028088449.1 147 RWHKTGKTRPVFL-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 194
                     8************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MTWCNDSQII STTSSKENLA IDAKTDENTI ITCPSCGHNI ELQDQAGIQD LPGLPAGVKF  60
DPSDQEILDH LEAKVLSDTH KLHPLIDEFI PTLEGENGIC YTHPEKLPGV SKDGQIRHFF  120
HRPSKAYTTG TRKRRKVHTD DDGGETRWHK TGKTRPVFLG GAVKGFKKIL VLYTNYGRQR  180
KPEKTNWVMH QYHLGNNEEE KDGELVVSKV FYQTQPRQCG SSVKDSLKKK SRTRIGHDDD  240
SPIIKNTPYV EYYNNPPLIS YDIGSQNRGS SPQLIPNLVL QGDGPSFIHL PTNSSKGKVL  300
ERT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-125NAC family protein