PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088611.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 351aa    MW: 40655.2 Da    PI: 9.4462
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1354.6e-1127813690
            FAR1 36 skegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                    s eg+r+ +k++   ++++raet tgC+a+l vk++  +gk++v++++++HnHel+
  XP_028088611.1 27 SDEGFRKVDKRD-PLTKNPRAETGTGCQARLFVKLDVnTGKFVVIDFKEKHNHELV 81
                    679999999998.9999*******************99****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MMLAAAEVLG LMSAERRAAD ISKGCGSDEG FRKVDKRDPL TKNPRAETGT GCQARLFVKL  60
DVNTGKFVVI DFKEKHNHEL VSLDCTHILP SQRKISTTQA IQLDLALESG LHLGQTFEFV  120
GKEADGRQSL GFLKLDQKNY LRTKRQKSLV NGEDYIHSDF NLNEFFIYFE RVLCEKRYKE  180
LEVEYALYQR LPRVRAPFRM LSQMGNVFTK NIFEEFQDEY FLSVESDIQA IEYYTQLLIL  240
LLEKNARKVK MEMDSSLACS CTKFERKGIL CSHCLKVVRE ILKLKEVPLQ YIMKKWIKQA  300
RTKAVKDKLG YKIQVDVKFQ QASRYKTLMT AFRAIAYRVA VTKETYDFSC S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-18FAR1 family protein