PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088689.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 237aa    MW: 27048.8 Da    PI: 6.6349
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.6e-1164115255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +  h+e+Er+RR+++ +  + Lr+llP       ++K s ++  ++ v+YIk+L+
  XP_028088689.1  64 KIVHKEIERKRRQEMGNLHASLRSLLPLeY---IKGKRSMSDHIQESVNYIKHLE 115
                     667*************************77...********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MFPFNESDHD ELVFQIPSIL FEENADKQDP IMGFVAPESS NLTADTVGKR PQKLVENTNN  60
STQKIVHKEI ERKRRQEMGN LHASLRSLLP LEYIKGKRSM SDHIQESVNY IKHLEKNIKQ  120
LSIKRDKLKD MPNSSVVSGT SSSSNNSLLY NVTVNPCRGG VEILITSGFR EEVFPLSRVL  180
QILLQEGLEV VSYVSTEVND RLLHTIRSEV SDPTCIDQSV LQQKLTDMIR KHWLPDY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17176ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.18e-41bHLH family protein