PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088693.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 224aa    MW: 25562.7 Da    PI: 6.4164
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-1169120255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     + + + +Er+RR+++ + ++ Lr+ lP       ++K s ++  e+Av+YIk+L+
  XP_028088693.1  69 KINRSDIERKRRREMSTLYASLRSELPLeY---IKGKRSTSDHMEEAVNYIKNLE 120
                     667789**********************77...*******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MFPFHQNDDL SQIPCTTHHQ QHGIDQDLIF SGLDSLELER VNNSSATNYL TTTQDSEHTS  60
TGVVDKDKKI NRSDIERKRR REMSTLYASL RSELPLEYIK GKRSTSDHME EAVNYIKNLE  120
KNIQQLRHKR DELKKFSSPD SLYSGDGNSS HFFTVCPCLG GVKIVFSSGF NEEKLQLSRV  180
MEFLLEEGLN VVTCASTKVN DKLIHTIQCE IPMFNACQFA SFGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17781RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.12e-37bHLH family protein