PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088696.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 223aa    MW: 25459.5 Da    PI: 5.9895
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-1167116455
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     + +  Er+RR+++N+  + Lr+ lP       ++K s ++  e+Av+YIk L+
  XP_028088696.1  67 KRSDTERKRRREMNTLCASLRSELPLeY---IKGKRSTSDHIEEAVNYIKTLE 116
                     66789*********************77...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MFPFDQNDGS SHQIPCTTHH QQHDINQDLI FSGLDALELE RINNSTTNHL SYDHTSTSVM  60
DKDKKIKRSD TERKRRREMN TLCASLRSEL PLEYIKGKRS TSDHIEEAVN YIKTLEKNIQ  120
ELDHKRDELK KSSNPEDGSS SYFTVGPCLG GVKIVFSCGF DEEKLQLSRV MEFLLEEGLN  180
VVTCVSTKAN DKLLHTIQCE ATDLKCFNHS ELQQKLNNVV TDP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17377RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-38bHLH family protein