PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088715.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 270aa    MW: 29632.6 Da    PI: 10.7468
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.9e-14102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I++++ ++Rt+ q+ s+ qky
   XP_028088715.1 102 PWTEEEHRIFLVGLEKLGKGDWRGISKKFVTTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTN TIHKGMSLVG GLRLFGVQLL HTSSSSSSIA IKKSFSTDCL  60
SPSSSTSSQV SMDENTNDRK IPNGYLSDGL ISRSQERKKG VPWTEEEHRI FLVGLEKLGK  120
GDWRGISKKF VTTRTPTQVA SHAQKYFLRQ NSLNKKKRRP SLFDVQVGKD KLVVANTSMP  180
HEASISWGLG QTNGSIKGFD HSSREQVFKA SQPSMPVWVY GSFQTKSITA SNLTKSTVQN  240
AAPDLELTLA ATRPLNPSVW STKITLRSSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155159KKKRR
2155160KKKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-48MYB_related family protein