PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088727.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 253aa    MW: 27571.7 Da    PI: 8.2592
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.74.9e-3246101359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     k rY+eClkNhA+ lGghavDGCgEf+p+ g++g+ +alkCaAC+CHRnFHR+e+++
  XP_028088727.1  46 KPRYRECLKNHAVGLGGHAVDGCGEFLPA-GADGSLDALKCAACNCHRNFHRKESDS 101
                     679*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEFEDQEEHE EEIGLPPSYY DSLGNSSSRP KMSTSVSTGV DPPPRKPRYR ECLKNHAVGL  60
GGHAVDGCGE FLPAGADGSL DALKCAACNC HRNFHRKESD STTVGGGGEV LNFPHHHHPP  120
PPHFLAPPHQ QFSPYYRTPS GYLHVAPHQR PLALPSTSGG GGGGGGGGSQ SREDEEDMSN  180
PSNMSMGGSS KKRFRTKFTG EQKDKMLDLA EKLGWRIQKQ DEAVVTFSAK TGVKRHVLKV  240
WMHNNKHTLG KKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-61ZF-HD family protein