PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088753.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 575aa MW: 63349.1 Da PI: 6.6734

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.4	1.6e-33	346	400	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++LGGsekAtPk +l+lmkv++Lt++hvkSHLQkYR+ XP_028088753.1 346 KPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLKLMKVESLTIYHVKSHLQKYRT 400 79****************************************************8 PP
2	Myb_DNA-binding	53.3	6.5e-17	348	399	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m + +t +++ks++qky+ XP_028088753.1 348 RMRWTPELHEAFVEAVNKLGGSekaTPKGVLKLMKvESLTIYHVKSHLQKYR 399 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MARGFFSTTR QKLIKAKKNN TRHRSLRRRS VTEPRLNPPV QLQDDLSYIY VCIEFCQSFS 60 VSRLSVIFRL LVCHAYMNLI QLPTLEVEKM EARPALSIQS SSTGQLSNLG ASGALSSSLP 120 ILPSEEKYPQ LPDSQQVSME REINANSVGL LSSLPSNSEV AGPMFSSMSG FSNNLHFSSI 180 AHLEKHSRKY PFISQSSKSG TSMPLDRCDS GMLQSTASSN NYSWCADSPP DFFNYPVNAP 240 TRNCQIGSCN NGVCTMATED LSKRTDWHDW ADQLINDDDS LTTNWNELFV DSSVEDPEPK 300 IAYQGVKPST NFLAVQPQVP QQIPAPSGEP CGVLSSTTSA SSAPIKPRMR WTPELHEAFV 360 EAVNKLGGSE KATPKGVLKL MKVESLTIYH VKSHLQKYRT ARYRPESSDG SSEKRLTPIE 420 ELTSLDLKMG IDITEALRLQ VEVQKRLHDQ LEIQRKLQLR IEEQGRNLQM MFEKQCKGGD 480 FLKTSSSSAL ENPSSAEMMD AIPNSPTSNN ESGASQLDQQ ESENAKVNAN TASVQVSSKL 540 GEKQKAPGSE ASEDLEANVV GGSSSQPSRR AKPGE

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MARGFFSTTR QKLIKAKKNN TRHRSLRRRS VTEPRLNPPV QLQDDLSYIY VCIEFCQSFS  60
VSRLSVIFRL LVCHAYMNLI QLPTLEVEKM EARPALSIQS SSTGQLSNLG ASGALSSSLP  120
ILPSEEKYPQ LPDSQQVSME REINANSVGL LSSLPSNSEV AGPMFSSMSG FSNNLHFSSI  180
AHLEKHSRKY PFISQSSKSG TSMPLDRCDS GMLQSTASSN NYSWCADSPP DFFNYPVNAP  240
TRNCQIGSCN NGVCTMATED LSKRTDWHDW ADQLINDDDS LTTNWNELFV DSSVEDPEPK  300
IAYQGVKPST NFLAVQPQVP QQIPAPSGEP CGVLSSTTSA SSAPIKPRMR WTPELHEAFV  360
EAVNKLGGSE KATPKGVLKL MKVESLTIYH VKSHLQKYRT ARYRPESSDG SSEKRLTPIE  420
ELTSLDLKMG IDITEALRLQ VEVQKRLHDQ LEIQRKLQLR IEEQGRNLQM MFEKQCKGGD  480
FLKTSSSSAL ENPSSAEMMD AIPNSPTSNN ESGASQLDQQ ESENAKVNAN TASVQVSSKL  540
GEKQKAPGSE ASEDLEANVV GGSSSQPSRR AKPGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-96	G2-like family protein