PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088756.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 486aa MW: 52865.8 Da PI: 5.0451

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	257	311	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++LGGsekAtPk +l+lmkv++Lt++hvkSHLQkYR+ XP_028088756.1 257 KPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLKLMKVESLTIYHVKSHLQKYRT 311 79****************************************************8 PP
2	Myb_DNA-binding	53.6	5.2e-17	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m + +t +++ks++qky+ XP_028088756.1 259 RMRWTPELHEAFVEAVNKLGGSekaTPKGVLKLMKvESLTIYHVKSHLQKYR 310 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MEARPALSIQ SSSTGQLSNL GASGALSSSL PILPSEEKYP QLPDSQQVSM EREINANSVG 60 LLSSLPSNSE VAGPMFSSMS GFSNNLHFSS IAHLEKHSRK YPFISQSSKS GTSMPLDRCD 120 SGMLQSTASS NNYSWCADSP PDFFNYPVNA PTRNCQIGSC NNGVCTMATE DLSKRTDWHD 180 WADQLINDDD SLTTNWNELF VDSSVEDPEP KIAYQGVKPS TNFLAVQPQV PQQIPAPSGE 240 PCGVLSSTTS ASSAPIKPRM RWTPELHEAF VEAVNKLGGS EKATPKGVLK LMKVESLTIY 300 HVKSHLQKYR TARYRPESSD GSSEKRLTPI EELTSLDLKM GIDITEALRL QVEVQKRLHD 360 QLEIQRKLQL RIEEQGRNLQ MMFEKQCKGG DFLKTSSSSA LENPSSAEMM DAIPNSPTSN 420 NESGASQLDQ QESENAKVNA NTASVQVSSK LGEKQKAPGS EASEDLEANV VGGSSSQPSR 480 RAKPGE

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MEARPALSIQ SSSTGQLSNL GASGALSSSL PILPSEEKYP QLPDSQQVSM EREINANSVG  60
LLSSLPSNSE VAGPMFSSMS GFSNNLHFSS IAHLEKHSRK YPFISQSSKS GTSMPLDRCD  120
SGMLQSTASS NNYSWCADSP PDFFNYPVNA PTRNCQIGSC NNGVCTMATE DLSKRTDWHD  180
WADQLINDDD SLTTNWNELF VDSSVEDPEP KIAYQGVKPS TNFLAVQPQV PQQIPAPSGE  240
PCGVLSSTTS ASSAPIKPRM RWTPELHEAF VEAVNKLGGS EKATPKGVLK LMKVESLTIY  300
HVKSHLQKYR TARYRPESSD GSSEKRLTPI EELTSLDLKM GIDITEALRL QVEVQKRLHD  360
QLEIQRKLQL RIEEQGRNLQ MMFEKQCKGG DFLKTSSSSA LENPSSAEMM DAIPNSPTSN  420
NESGASQLDQ QESENAKVNA NTASVQVSSK LGEKQKAPGS EASEDLEANV VGGSSSQPSR  480
RAKPGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	2e-97	G2-like family protein