PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089038.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 329aa MW: 36725.8 Da PI: 7.8768

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_028089038.1 14 RGPWAPEEDAKLKEYIEKHGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	34.2	6e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_028089038.1 69 GEFSDNEDRIICTLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78999**************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGRAPCCDKE NVKRGPWAPE EDAKLKEYIE KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSDNEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMKI 120 GIGIVPSSPN QRRPHHHQPT TYPFISLLHH NSSSSPSPSP SSPLSSSSSY KYHNTQTSSF 180 IGYDFEPFSI PSSSTANSTV LQAQEVYVSP NLLFGGEAAS CSSSDGSFNS NNQISHGREM 240 ESDYGGHMGL QSYYHLYNGV GENLKYMVSS GVGGGNANNG LFYGGESETP IDYSSVEEIK 300 QLINTNTNIY NNMNFYVDDN QREEKLMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-70	MYB family protein