PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089277.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 642aa MW: 70982.2 Da PI: 4.5343

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.1	1e-36	109	206	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 lfqrlw++eDei lLqG+++++a++g s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ +k+ sgke f+++hdq +fe+s+k XP_028089277.1 109 LFQRLWTDEDEIELLQGFLNYTAQRGGntSHHHDTTAFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKIGSGKEYIFKTPHDQATFEISRK 203 79*********************98545666********************************************************** PP DUF573 95 iWg 97 iW XP_028089277.1 204 IWS 206 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MASDQDHTTV YGGEDLDEDD DDDTEEDDLA LIPSQHHHLR DDVEEDDLDD DDDDDTSSSA 60 ALVTVALPSN PLPLTVVADA NRLPIKHVTI AAVADEKKPL PALDESRRLF QRLWTDEDEI 120 ELLQGFLNYT AQRGGNTSHH HDTTAFYDQI KSKLQLDFNK NQLVEKLRRL KKKYRNVLNK 180 IGSGKEYIFK TPHDQATFEI SRKIWSSIEE AGLEEDIANP NPNPNLTHHQ NPSTHLHLSN 240 PTQFKKDKKK KKKKHKRGKK GKSDPPWISD IEWPCKTPSE IPSSSGWPVL NLQLGRIIRL 300 PSAEEQDRFA ATQAQQKALK ASQEFFAAAK DSDGEEDDDS DDDDLMDEDG NEEYSFFMKM 360 FTEDGELRGF YEKNCEGGDF SCLVCEGIGK KIGKRFKGCV ALVQHSVSIA KTKKKQAHRA 420 LAQVICKVLG WNIDRLPTIV LSLGDPLSRS LAKSGESQGN AEDLHMLNQN SGSVNVNNGE 480 LIVKEVSNVG QEGELHNSSV PGISNVDGDN VMLCEGNAEI GMEDLHMLNQ NSSVENVNNG 540 ELVVKEVSNV GHEGVLHNSS FPGMSSVNGD NVMLYESSLK VGDANECTEN LENGDSSVVD 600 GKTEGVVNGL EPFKDNGTGN NMKNNQTQIV ANDLKDNNGD EN

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MASDQDHTTV YGGEDLDEDD DDDTEEDDLA LIPSQHHHLR DDVEEDDLDD DDDDDTSSSA  60
ALVTVALPSN PLPLTVVADA NRLPIKHVTI AAVADEKKPL PALDESRRLF QRLWTDEDEI  120
ELLQGFLNYT AQRGGNTSHH HDTTAFYDQI KSKLQLDFNK NQLVEKLRRL KKKYRNVLNK  180
IGSGKEYIFK TPHDQATFEI SRKIWSSIEE AGLEEDIANP NPNPNLTHHQ NPSTHLHLSN  240
PTQFKKDKKK KKKKHKRGKK GKSDPPWISD IEWPCKTPSE IPSSSGWPVL NLQLGRIIRL  300
PSAEEQDRFA ATQAQQKALK ASQEFFAAAK DSDGEEDDDS DDDDLMDEDG NEEYSFFMKM  360
FTEDGELRGF YEKNCEGGDF SCLVCEGIGK KIGKRFKGCV ALVQHSVSIA KTKKKQAHRA  420
LAQVICKVLG WNIDRLPTIV LSLGDPLSRS LAKSGESQGN AEDLHMLNQN SGSVNVNNGE  480
LIVKEVSNVG QEGELHNSSV PGISNVDGDN VMLCEGNAEI GMEDLHMLNQ NSSVENVNNG  540
ELVVKEVSNV GHEGVLHNSS FPGMSSVNGD NVMLYESSLK VGDANECTEN LENGDSSVVD  600
GKTEGVVNGL EPFKDNGTGN NMKNNQTQIV ANDLKDNNGD EN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	253	KKDKKKKKK
2	248	254	KKKKKKK
3	248	260	KKKKKKKHKRGKK
4	249	257	KKDKKKKKK
5	249	261	KKKKKKKHKRGKK
6	250	262	KKKKKKKHKRGKK
7	410	416	AKTKKKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	4e-52	GeBP family protein