PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028089285.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family M-type_MADS
Protein Properties Length: 201aa    MW: 22608.6 Da    PI: 8.875
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028089285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF54.91.1e-172166449
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    e++  r +tfskRr g+ KKA+EL+ LC++e  v++fs++gk + +
  XP_028089285.1 21 ESEEDRLITFSKRRSGLYKKASELCALCNTELVVLMFSPSGKPFSF 66
                    78899************************************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MESSKKQTKG RQRIDTSRRR ESEEDRLITF SKRRSGLYKK ASELCALCNT ELVVLMFSPS  60
GKPFSFAHPN IDVIARRFLK LPQEDVTGGI INARLRNRIN ELNERLTQLG DEAQAEKERG  120
QMLSHMAKVR PNKPLCDANI DELSDNDAGM LKAWLLELQD RIHNRFEELA ANATAYAGAP  180
ASLVDDTNVA SSRQGHGGMH F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.16e-23M-type_MADS family protein