PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028089514.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 208aa    MW: 21759.1 Da    PI: 7.7003
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028089514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.12.6e-5823118297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+kyre+ege
  XP_028089514.1  23 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLAKYREMEGE 117
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_028089514.1 118 K 118
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MADSDNESGG HNNANSELSA RPREQDRFLP IANVSRIMKK ALPANAKISK DAKETVQECV  60
SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEEY VEPLKVYLAK YREMEGEKTT  120
MGRQGDKDGS SGGGGSAAGG GVSPGGGGFN GGGMYGGMQG GSTMMMMGQG HHHHHHQGQM  180
YGSGYQMGIG KGGAGSAGSG GGASTVRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-75NF-YB family protein