PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028089587.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 220aa    MW: 25648.3 Da    PI: 9.1423
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028089587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.92.2e-2525114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn Y+ ++GF++r+++s+k+k +++ ++r +vC+keg+r+ +k++   ++++raetrtgC+ +l +k ++ +gk++vt+++++HnH+l+
  XP_028089587.1  25 DFYNIYGGRMGFNIRRDYSRKNKFTNQLICRLLVCNKEGFRKVDKRD-PLAKNPRAETRTGCETRLYIKSDEsTGKFVVTDFKEKHNHDLV 114
                     6*******************************************999.999*******************999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MELENDCAWK PKQGMTFDSK QCAYDFYNIY GGRMGFNIRR DYSRKNKFTN QLICRLLVCN  60
KEGFRKVDKR DPLAKNPRAE TRTGCETRLY IKSDESTGKF VVTDFKEKHN HDLVSPECAH  120
MLPSQRKIST TQAIELELAA QSGLRLGQYF ELMSREAGGK QCLGYTKLDQ KIYLRTKRQQ  180
SLTYGEVGNV LQYFKEKSLQ NPSIFYVFQL DNEEQIINML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-34FAR1 family protein