PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089649.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 432aa MW: 48149.9 Da PI: 5.2629

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.5	1.2e-13	191	242	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P++ + ++ + a+i A++++k+L+ XP_028089649.1 191 QRMTHIAVERNRRRQMNDHLTSLRSLMPSS---YIQRGDQASIIGGAIDFLKELE 242 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MESLQGPINP CLFGEEHVDV ETTNKTLGFS CFGQFVSADH HSLSFQEEEE EETQLRLRRS 60 GSLEDKMPFL EMLQSVESPS YSPLCELSLQ ALLNLQQQQQ SKNNPWDQSH SFQAPEQPES 120 CLTSYHDVLV KSETNNQQQQ VKPPVEEMEM EMEMAETRTG RDERGLKTVV KREKRKRMKP 180 AAKNKEEAES QRMTHIAVER NRRRQMNDHL TSLRSLMPSS YIQRGDQASI IGGAIDFLKE 240 LEQLLQSLQA QKRMKKSELS SDQGRGGEEG GGGDTASSST SSSSTTATEN CTEVGITTTA 300 RSKGRSNEFT AEKKSAAADV RVTVIQKHVN LKVECPRIPG QLLKAIVALE GLKLTVLHLN 360 ITSFETSIHY SFNLKISISS TNSFCFLGGT TVNHFDLEER KAAIEDDCEV GSADGIAVAV 420 HQIFSFVNND DI

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MESLQGPINP CLFGEEHVDV ETTNKTLGFS CFGQFVSADH HSLSFQEEEE EETQLRLRRS  60
GSLEDKMPFL EMLQSVESPS YSPLCELSLQ ALLNLQQQQQ SKNNPWDQSH SFQAPEQPES  120
CLTSYHDVLV KSETNNQQQQ VKPPVEEMEM EMEMAETRTG RDERGLKTVV KREKRKRMKP  180
AAKNKEEAES QRMTHIAVER NRRRQMNDHL TSLRSLMPSS YIQRGDQASI IGGAIDFLKE  240
LEQLLQSLQA QKRMKKSELS SDQGRGGEEG GGGDTASSST SSSSTTATEN CTEVGITTTA  300
RSKGRSNEFT AEKKSAAADV RVTVIQKHVN LKVECPRIPG QLLKAIVALE GLKLTVLHLN  360
ITSFETSIHY SFNLKISISS TNSFCFLGGT TVNHFDLEER KAAIEDDCEV GSADGIAVAV  420
HQIFSFVNND DI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	203	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	4e-49	bHLH family protein